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EDP04681 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04681" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04681Predicted protein (400 aa)    
Predicted Functional Partners:
EDP01934
Integral membrane Yip1-family protein (231 aa)
     
 
  0.869
EDP05737
Predicted protein (185 aa)
     
 
  0.727
EDP06823
Predicted protein (467 aa)
     
        0.530
EDP04997
Potential GTPase activation protein (1138 aa)
     
        0.516
RABD1
Small rab-related GTPase (203 aa)
     
 
  0.512
COG6
Component of oligomeric golgi complex 6 (681 aa)
     
        0.510
COG4
Component of oligomeric golgi complex 4 (1094 aa)
     
        0.508
EDP09223
NEF1-like protein (1346 aa)
     
        0.489
EDO96384
RNA binding protein (177 aa)
     
        0.476
COG8
Component of oligomeric golgi complex 8 (546 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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