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OFD1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"OFD1" - Basal body protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFD1Basal body protein (1352 aa)    
Predicted Functional Partners:
POC18
Centriole proteome protein (2287 aa)
     
  0.972
IFT88
Intraflagellar transport particle protein 88 (782 aa)
           
  0.851
MOT3
Predicted protein (1739 aa)
     
  0.817
UNI3
Delta tubulin (447 aa)
         
  0.746
FAP59
Flagellar associated protein; Required for assembly of dynein regulatory complex (DRC) and inner dynein arm complexes, which are responsible for ciliary beat regulation, by acting as a molecular ruler that determines the 96 nanometer (nm) repeat length and arrangements of components in cilia and flagella (PubMed-25395538). Together with CCDC40/FAP172 forms a 96-nm-long complex in flagella. This complex does not act as a physical ruler, but rather act as a negative regulator for radial spokes- the complex lays along specific protofilaments, masking radial spoke binding sites and allowin [...] (894 aa)
           
  0.722
DHC7
Dynein heavy chain 7 (3540 aa)
         
  0.715
IFT172
Intraflagellar transport protein 172; Required for the maintenance and formation of cilia and participates in the control of flagellar assembly/disassembly at the tip. Involved in regulating the transition between anterograde and retrograde intraflagellar transport at the tip (1755 aa)
           
  0.700
TUE
Epsilon tubulin (478 aa)
         
  0.696
EDP04135
Predicted protein (248 aa)
       
  0.695
EDP08695
Predicted protein (443 aa)
     
 
  0.645
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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