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TAB2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"TAB2" - PsaB RNA binding protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAB2PsaB RNA binding protein (358 aa)    
Predicted Functional Partners:
CPLD12
Predicted protein (371 aa)
   
        0.708
PSAD
Photosystem I reaction center subunit II, 20 kDa (196 aa)
   
   
  0.702
APE1
Predicted protein (276 aa)
   
        0.639
PSAE
Photosystem I 8.1 kDa reaction center subunit IV (97 aa)
   
     
  0.639
CPLD36
Predicted protein (196 aa)
   
        0.638
CPLD38
Predicted protein (190 aa)
   
        0.636
MBD1
NAC2 protein (1385 aa)
     
   
  0.632
ATPG
CF0 ATP synthase subunit II precursor; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity) (209 aa)
   
        0.629
GUN4
Tetrapyrrole-binding protein (260 aa)
   
        0.589
SECA1
Chloroplast-associated SecA protein (1029 aa)
   
        0.581
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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