STRINGSTRING
PHC19 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PHC19" - Cell wall protein pherophorin-C19 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC19Cell wall protein pherophorin-C19 (383 aa)    
Predicted Functional Partners:
PHC18
Cell wall protein pherophorin-C18 (486 aa)
           
  0.805
PHC4
Cell wall protein pherophorin-C4 (493 aa)
     
     
0.720
PST1
Phosphoserine aminotransferase (405 aa)
           
  0.711
EDP06547
Predicted protein (79 aa)
     
        0.704
EDP04675
Predicted protein (229 aa)
     
        0.691
FUT11
Alpha 1,3 fucosyltransferase (407 aa)
     
        0.690
EDP08842
Predicted protein (93 aa)
     
        0.687
EDP09077
Predicted protein (499 aa)
     
        0.683
EDP08504
Predicted protein (87 aa)
     
        0.683
GTR4
Dolichol-phosphate glucosyltransferase (373 aa)
     
        0.682
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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