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TRP4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"TRP4" - Transient receptor potential ion channel protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRP4Transient receptor potential ion channel protein (547 aa)    
Predicted Functional Partners:
EDP02059
Predicted protein (510 aa)
     
        0.660
CLR7
Predicted protein of CLR family (1285 aa)
     
        0.638
EDP00639
Hypothetical protein (73 aa)
     
        0.615
EDO96801
Predicted protein (2261 aa)
     
        0.522
EDP05763
Predicted protein (206 aa)
     
        0.514
EDP07576
Predicted protein (580 aa)
     
        0.511
EDO97260
Histone acetyltransferase (322 aa)
     
        0.511
EDP04470
Predicted protein (879 aa)
     
        0.509
EDP02296
Predicted protein (605 aa)
     
        0.507
CLR15
Predicted protein of CLR family (728 aa)
     
        0.506
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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