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HAD1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HAD1" - Haloacid dehalogenase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAD1Haloacid dehalogenase (287 aa)    
Predicted Functional Partners:
EDP03655
FAD synthetase (578 aa)
         
  0.808
EDP08856
Glutaredoxin/malate transporter fusion protein (940 aa)
         
  0.808
EDP05064
Riboflavin kinase (421 aa)
         
  0.804
EDP04905
Oligopeptidase (220 aa)
           
  0.787
RFK2
Riboflavin kinase (399 aa)
           
  0.781
TF2F
Transcription factor IIF (206 aa)
           
  0.780
ADC1
Aminodeoxychorismate synthase (724 aa)
         
  0.726
EDO98955
Riboflavin biosynthesis protein (363 aa)
           
  0.712
GYD1
Glycolate dehydrogenase (1095 aa)
       
  0.624
EDO99099
Predicted protein (507 aa)
       
  0.618
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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