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EDP04916 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04916" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04916Predicted protein (778 aa)    
Predicted Functional Partners:
EDP05135
SNF2 superfamily protein (1610 aa)
   
  0.874
EDP09509
Predicted protein (494 aa)
     
    0.861
EDP00856
Predicted protein (456 aa)
     
  0.807
EDP05134
Predicted protein (158 aa)
     
  0.802
EDO96746
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (444 aa)
     
  0.800
EDP08691
Predicted protein (233 aa)
     
  0.793
S6K1
Ribosomal protein S6 kinase (319 aa)
     
  0.791
NOT1
Component of CCR4-NOT transcriptional regulator complex (1440 aa)
     
  0.790
XAB2
Transcription-coupled DNA repair protein (886 aa)
     
    0.788
EDO98188
Predicted protein (75 aa)
     
  0.786
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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