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IRK1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"IRK1" - Inwardly-rectifying potassium channel in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRK1Inwardly-rectifying potassium channel (708 aa)    
Predicted Functional Partners:
EDP09181
Potassium channel (1488 aa)
     
   
  0.730
MRP6-3
ABC transporter, multidrug resistance associated protein (428 aa)
     
  0.646
MRP6-5
ABC transporter, multidrug resistance associated protein (295 aa)
     
  0.619
EDP01031
Predicted protein (292 aa)
     
  0.619
EDP09575
Predicted protein (550 aa)
     
  0.612
EDP07348
Predicted protein (756 aa)
     
        0.604
MRP2
ABC transporter, multidrug resistance associated protein (1417 aa)
     
  0.603
MRP7
ABC transporter, multidrug resistance associated protein (378 aa)
     
  0.603
EDP04296
Predicted protein (163 aa)
     
  0.603
EDP05763
Predicted protein (206 aa)
     
    0.598
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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