STRINGSTRING
SUFE protein (Chlamydomonas reinhardtii) - STRING interaction network
"SUFE" - Cysteine desulfuration protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUFECysteine desulfuration protein (216 aa)    
Predicted Functional Partners:
SUFS1
Cysteine desulfurase (430 aa)
   
  0.957
SUFS2
Cysteine desulfurase (406 aa)
   
  0.952
EDO98384
Predicted protein (453 aa)
   
  0.952
SUFC
Iron-sulfur cluster assembly protein (284 aa)
   
 
  0.948
SUFD
Iron-sulfur cluster assembly protein (482 aa)
 
 
  0.943
EDP02004
Predicted protein (493 aa)
   
  0.933
EDP01442
Predicted protein (451 aa)
   
  0.933
EDO97026
Aminotransferase-like protein (355 aa)
   
  0.933
SUFB
Iron-sulfur cluster assembly protein (511 aa)
 
 
  0.923
ISU1
Iron-sulfur cluster assembly scaffold protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (163 aa)
   
 
  0.822
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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