STRINGSTRING
EDP04964 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04964" - Metalloprotease in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04964Metalloprotease (391 aa)    
Predicted Functional Partners:
EDP09605
Predicted protein (73 aa)
       
      0.666
EDP03484
Predicted protein (392 aa)
     
 
  0.612
EDO96849
Predicted protein (684 aa)
     
      0.554
EDP06527
Threonine aldolase family protein (412 aa)
     
      0.542
EDO99453
Predicted protein (240 aa)
     
   
  0.528
EDP01478
Predicted protein (374 aa)
     
        0.518
NTRC1
NADPH-dependent thioredoxin reductase (517 aa)
   
 
  0.509
EXO70
Component of the exocyst complex (803 aa)
     
        0.503
CPLD50
Predicted protein (409 aa)
     
        0.482
EDP09679
Predicted protein (419 aa)
     
        0.480
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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