STRINGSTRING
EDP04989 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04989" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04989Predicted protein (597 aa)    
Predicted Functional Partners:
RPB9
DNA-directed RNA polymerase II, 14.5 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (118 aa)
     
 
    0.840
RPB11
DNA-directed RNA polymerase II, 13.6 kDa polypeptide (115 aa)
     
 
    0.773
MUT6
DEAH-box RNA helicase (1278 aa)
     
  0.748
EDP00885
Predicted protein (75 aa)
     
 
    0.746
SPL5
pre-mRNA-splicing factor (488 aa)
     
 
  0.734
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
 
    0.721
EDP03137
Predicted protein (494 aa)
     
 
    0.715
EDP04169
Predicted protein (301 aa)
     
        0.708
EDP03322
Predicted protein (811 aa)
     
 
  0.707
TF2H2
Transcription factor TFIIH, 44 kDa subunit (413 aa)
     
        0.705
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (10%) [HD]