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EDP04998 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04998" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04998Predicted protein (307 aa)    
Predicted Functional Partners:
EDP06749
Predicted protein (295 aa)
     
  0.926
RPL24
Ribosomal protein L24 (149 aa)
       
      0.549
EDO96089
Predicted protein (65 aa)
       
      0.549
UBA1
Ubiquitin-activating enzyme E1 (1061 aa)
     
      0.496
EDO99634
Predicted protein (366 aa)
       
 
  0.466
PYR7
CTP synthase (306 aa)
     
      0.461
RPL22
Ribosomal protein L22 (127 aa)
       
      0.461
PAP1
Poly(a) polymerase (407 aa)
     
        0.425
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
   
        0.416
EDO96621
THO complex 3 G protein beta subunit (347 aa)
   
        0.411
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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