STRINGSTRING
EDP05037 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05037" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05037Predicted protein (410 aa)    
Predicted Functional Partners:
EDP06127
Predicted protein (437 aa)
   
 
  0.854
EDP03477
Predicted protein (264 aa)
   
 
  0.854
EDO98953
DNA binding protein (661 aa)
     
  0.819
DNL4
DNA ligase IV (831 aa)
     
  0.794
POLL1
Pol lambda-related class X DNA repair polymerase (1599 aa)
     
  0.789
EDO97376
DNA repair glycosylase (292 aa)
       
 
  0.763
EDO99592
Predicted protein (1384 aa)
   
  0.748
EDP09999
Predicted protein (424 aa)
     
 
  0.692
PSO2
Artemis-related DNA-crosslink repair exonuclease (624 aa)
   
 
  0.686
EDP01805
Predicted protein (550 aa)
   
 
  0.686
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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