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EDP05056 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05056" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05056Predicted protein (111 aa)    
Predicted Functional Partners:
ALK3
Aurora-like kinase (718 aa)
     
        0.717
PHC4
Cell wall protein pherophorin-C4 (493 aa)
     
        0.706
EDO96489
Predicted protein (118 aa)
     
        0.701
EDP01190
Predicted protein (253 aa)
     
        0.699
EDO96490
Predicted protein (531 aa)
     
        0.696
FUT11
Alpha 1,3 fucosyltransferase (407 aa)
     
        0.693
EDO99417
Predicted protein (1769 aa)
     
        0.693
GOX18
Glyoxal or galactose oxidase (733 aa)
     
        0.689
EDO99009
Predicted protein (1066 aa)
     
        0.688
EDP04940
Predicted protein (729 aa)
     
        0.686
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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