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EDP05066 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05066" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05066Predicted protein (1712 aa)    
Predicted Functional Partners:
DCL3
Dicer-like protein (3556 aa)
     
        0.674
EDO98602
Predicted protein (300 aa)
     
        0.662
SMG1
Phosphatidylinositol 3-kinase-related protein kinase (4881 aa)
     
        0.661
EDO97239
Predicted protein (859 aa)
     
        0.648
EDO99825
Predicted protein (1374 aa)
     
        0.619
EDO97705
Predicted protein (478 aa)
     
        0.572
EDP01076
Predicted protein (717 aa)
     
        0.554
EDO99548
Predicted protein (261 aa)
     
        0.525
EDP09200
Predicted protein (1008 aa)
     
        0.524
EDP05989
SEC7/BIG-like ARF-GEF (1046 aa)
     
        0.524
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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