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AP4E1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AP4E1" - Epsilon-adaptin in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP4E1Epsilon-adaptin (925 aa)    
Predicted Functional Partners:
AP4B4
Beta-4-adaptin (858 aa)
     
  0.982
AP1M1
Mu1-Adaptin (425 aa)
     
  0.981
AP1B1
Hypothetical protein (186 aa)
     
  0.977
AP1S1
Sigma1-Adaptin (158 aa)
     
  0.976
AP4S4
Sigma4-Adaptin (144 aa)
       
  0.972
COPB1
Beta-cop; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (959 aa)
     
  0.887
AP2S2
Sigma2-Adaptin (143 aa)
       
  0.881
AP2M2
Mu2-Adaptin (438 aa)
     
  0.879
EDP07977
ARF-like GTPase ARLP3 (392 aa)
       
  0.839
ARL5
Small ARF-related GTPase (182 aa)
       
  0.839
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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