STRINGSTRING
EDP05102 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05102" - Nucleosome assembly protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05102Nucleosome assembly protein (245 aa)    
Predicted Functional Partners:
EDP00863
Nucleosome assembly protein (334 aa)
     
 
  0.836
cnapl
Nucleosome assembly protein (350 aa)
     
 
0.744
EDP00976
Predicted protein (262 aa)
     
  0.690
ASF1
Anti-silencing factor (225 aa)
     
 
  0.660
SMC4
Structural maintenance of chromosomes protein 4 (1237 aa)
     
 
    0.619
SMC2
Structural maintenance of chromosomes protein 2 (1165 aa)
     
 
    0.602
EDP08284
Predicted protein (1213 aa)
     
 
    0.554
EDP03322
Predicted protein (811 aa)
     
        0.552
EDO96731
Predicted protein (484 aa)
     
        0.552
EDP08954
Histone H2A variant (144 aa)
     
 
  0.547
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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