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EDP05108 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05108" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05108Predicted protein (408 aa)    
Predicted Functional Partners:
EDP05008
polyadenylated-RNA export factor (429 aa)
     
 
  0.971
REF1
RNA export factor (137 aa)
     
 
  0.883
EDP02014
Predicted protein (604 aa)
     
 
  0.828
XPO1
Exportin (1075 aa)
     
 
  0.809
EDP05842
DEAD/DEAH box helicase-related protein (496 aa)
   
 
  0.705
SPL3
SF3A3 splicing factor 3a, subunit 3 (508 aa)
     
        0.687
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
 
  0.638
EDP06719
Predicted protein (151 aa)
     
 
  0.620
EDP06185
Predicted protein (185 aa)
     
        0.613
EDO99837
RNA binding protein (316 aa)
     
 
  0.591
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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