• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EDP05128 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05128" - PAN2-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05128PAN2-like protein (979 aa)    
Predicted Functional Partners:
EDP08129
PAN3-like protein (285 aa)
     
 
  0.993
NOT1
Component of CCR4-NOT transcriptional regulator complex (1440 aa)
     
   
  0.858
CAF1
CCR4-associated factor (300 aa)
     
   
  0.855
NAB1
Nucleic acid binding protein; Putative nucleic acid binding protein (247 aa)
   
 
  0.692
EDP05472
Predicted protein (2510 aa)
     
   
  0.690
XRN1
Single-stranded RNA 5’->3’ exonuclease (171 aa)
     
   
  0.689
PCN1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
 
  0.686
XPO1
Exportin (1075 aa)
     
        0.681
EDO98404
Predicted protein (398 aa)
   
 
  0.667
EDP01523
Predicted protein (366 aa)
     
        0.656
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
Server load: low (9%) [HD]