STRINGSTRING
EDP05138 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05138" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05138Predicted protein (228 aa)    
Predicted Functional Partners:
EDO99231
Predicted protein (155 aa)
     
        0.720
MMP7
Metalloproteinase of VMP family (674 aa)
     
        0.720
EDP09621
Predicted protein (125 aa)
     
        0.710
EDO95921
Predicted protein (257 aa)
     
        0.700
EDP07354
Predicted protein (112 aa)
     
        0.699
EDP04858
Predicted protein (389 aa)
     
        0.687
MTA2
Hydroxyproline-rich glycoprotein (386 aa)
     
        0.687
EDP04857
Predicted protein (197 aa)
     
        0.686
EDP06907
Predicted protein (363 aa)
     
        0.679
SAG1
Plus agglutinin protein (559 aa)
     
        0.675
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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