STRINGSTRING
EDP05140 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05140" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05140Predicted protein (1122 aa)    
Predicted Functional Partners:
EDP02224
Predicted protein (1294 aa)
     
        0.669
EDP04004
Predicted protein (1256 aa)
     
        0.668
EDP03175
Histone methyltransferase (1708 aa)
     
        0.666
EDP03250
Predicted protein (803 aa)
     
        0.661
EDP09807
Predicted protein (1564 aa)
     
        0.659
EDP04836
Predicted protein (2600 aa)
     
        0.657
ESP1
Separase, cell cycle protease (2337 aa)
     
        0.654
FOR1
Formin (2196 aa)
     
        0.654
EDP02269
Predicted protein (686 aa)
     
        0.654
EDP08157
Predicted protein (1391 aa)
     
        0.653
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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