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EDP05143 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05143" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05143Predicted protein (1459 aa)    
Predicted Functional Partners:
EDP05142
Predicted protein (390 aa)
     
        0.720
EDP04902
Predicted protein (125 aa)
     
        0.677
EDP00357
Predicted protein (143 aa)
     
        0.670
PUS4
tRNA pseudouridine synthase (287 aa)
     
        0.668
LCI33
low-CO2-inducible protein (886 aa)
     
        0.666
GTR12
Glycosyl transferase (3180 aa)
     
        0.635
EDP01218
Predicted protein (181 aa)
     
        0.598
CGLD17
Predicted protein (928 aa)
     
        0.597
EDP01693
Predicted protein (84 aa)
     
        0.563
EDO97848
Predicted protein (157 aa)
     
        0.555
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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