STRINGSTRING
SUFA protein (Chlamydomonas reinhardtii) - STRING interaction network
"SUFA" - Iron-sulfur cluster assembly protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUFAIron-sulfur cluster assembly protein (162 aa)    
Predicted Functional Partners:
SUFC
Iron-sulfur cluster assembly protein (284 aa)
   
 
  0.941
SUFD
Iron-sulfur cluster assembly protein (482 aa)
   
 
  0.898
FDX6
Apoferredoxin (314 aa)
   
 
  0.848
FDX2
Apoferredoxin (123 aa)
   
 
  0.848
FDX4
Apoferredoxin (131 aa)
   
 
  0.848
FDX3
Apoferredoxin (187 aa)
   
 
  0.847
PETF
Apoferredoxin (126 aa)
   
 
  0.827
FDX5
Apoferredoxin (130 aa)
   
 
  0.826
MFDX1
Ferredoxin, adrenodoxin-like protein (171 aa)
   
 
  0.784
CDJ4
Chloroplast DnaJ-like protein (358 aa)
           
  0.776
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (6%) [HD]