STRINGSTRING
EDP05177 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05177" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05177Predicted protein (446 aa)    
Predicted Functional Partners:
EDP09959
RNA helicase (1203 aa)
     
        0.709
EDP05607
Predicted protein (1663 aa)
     
        0.706
EDP01582
Predicted protein (642 aa)
     
        0.706
POL1B
PolI-like DNA polymerase (894 aa)
     
        0.696
EDP02379
Predicted protein (1210 aa)
     
        0.693
ESP1
Separase, cell cycle protease (2337 aa)
     
        0.690
EDP06286
Predicted protein (533 aa)
     
        0.690
EDO99263
Predicted protein (458 aa)
     
        0.686
EDP04084
Predicted protein (1377 aa)
     
        0.681
EDP05522
Predicted protein (1017 aa)
     
        0.680
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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