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HYDEF protein (Chlamydomonas reinhardtii) - STRING interaction network
"HYDEF" - Iron hydrogenase assembly protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HYDEFIron hydrogenase assembly protein (1151 aa)    
Predicted Functional Partners:
HYDG
Hydrogenase assembly factor (567 aa)
   
  0.990
HYD1
Iron hydrogenase (497 aa)
 
   
  0.977
HYD2
Iron hydrogenase (505 aa)
 
   
  0.973
HYD3
Iron hydrogenase/prelamin A binding protein (479 aa)
 
     
  0.912
BIOA
Diaminopelargonic acid synthase (819 aa)
   
 
  0.911
BIOB
Biotin synthase (58 aa)
         
  0.826
ACK2
Acetate kinase (405 aa)
         
  0.816
FAP42
Flagellar associated protein, adenylate/guanylate kinase-like protein (2457 aa)
   
 
  0.790
RPL26
Ribosomal protein L26 (145 aa)
   
 
  0.783
EDP05885
Predicted protein (150 aa)
   
 
  0.783
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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