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STRINGSTRING
EDP05204 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05204" - ATP-dependent DNA helicase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05204ATP-dependent DNA helicase; Belongs to the helicase family (326 aa)    
Predicted Functional Partners:
EDO99505
Predicted protein (1212 aa)
     
 
  0.938
PCN1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
   
 
  0.813
ATR1
DNA damage-sensing protein kinase (3304 aa)
     
 
  0.779
EDP05600
DNA topoisomerase-like protein; DNA topoisomerase (772 aa)
   
 
  0.743
EDO97259
Predicted protein (294 aa)
   
 
  0.742
EDP02976
Predicted protein (714 aa)
   
 
  0.736
POLA1
DNA polymerase alpha subunit one; DNA polymerase (1114 aa)
     
 
  0.723
EDO99592
Predicted protein (1384 aa)
     
 
  0.680
EDP05330
Predicted protein (540 aa)
     
 
  0.673
TOP1
DNA topoisomerase I (586 aa)
       
 
  0.673
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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