STRINGSTRING
EDP05219 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05219" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05219Predicted protein (337 aa)    
Predicted Functional Partners:
EDP04662
Predicted protein (596 aa)
     
        0.523
VPS33
SM/Sec1-family protein (740 aa)
     
        0.494
EDP09454
Predicted protein (997 aa)
     
        0.476
EDP06399
Predicted protein (1292 aa)
     
        0.475
EDP06396
Predicted protein (183 aa)
     
        0.475
EDP03957
Predicted protein (625 aa)
     
        0.475
EDP06881
Predicted protein (674 aa)
     
      0.439
AMYA2
Alpha-amylase (413 aa)
     
        0.427
EDP03598
Predicted protein (436 aa)
     
        0.422
EDP06503
Predicted protein (656 aa)
     
        0.421
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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