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LCI30 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LCI30" - low-CO2-inducible protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCI30low-CO2-inducible protein (260 aa)    
Predicted Functional Partners:
EDO96830
Predicted protein (160 aa)
     
  0.999
RPS3a
Ribosomal protein S3a (259 aa)
     
  0.999
RPS4
Ribosomal protein S4 (261 aa)
     
  0.999
RPS6
Ribosomal protein S6 (248 aa)
     
  0.999
NGB1
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (691 aa)
     
 
  0.999
NGB2
Nucleolar GTP-binding protein (189 aa)
     
 
  0.999
EDP01097
Predicted protein (181 aa)
     
 
  0.999
RPS25
Ribosomal protein S25 (107 aa)
     
  0.998
EDO98904
Ribosome biogenesis pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (678 aa)
     
 
  0.998
RPS3
Ribosomal protein S3 (230 aa)
     
  0.998
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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