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PANB protein (Chlamydomonas reinhardtii) - STRING interaction network
"PANB" - Ketopantoate hydroxymethyltransferase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PANBKetopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (441 aa)    
Predicted Functional Partners:
PANC
Pantothenate synthetase (199 aa)
 
 
  0.928
BCA2
Branched-chain amino acid aminotransferase (375 aa)
       
  0.926
BCA1
Branched chain amino acid aminotransferase (456 aa)
       
  0.926
AAD1
Acetohydroxyacid dehydratase (604 aa)
         
  0.913
EDP05046
Predicted protein (260 aa)
     
        0.699
EDP05671
Predicted protein (693 aa)
         
  0.693
PANE
Ketopantoate reductase (290 aa)
       
  0.684
PBGD2
Porphobilinogen deaminase (380 aa)
           
  0.661
EDO98231
Predicted protein (248 aa)
     
        0.649
HYDEF
Iron hydrogenase assembly protein (1151 aa)
   
   
  0.634
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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