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EDP05294 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05294" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05294Predicted protein (455 aa)    
Predicted Functional Partners:
EDP03212
Predicted protein (1854 aa)
     
      0.573
EDP02188
Histone deacetylase (419 aa)
       
  0.569
EDP01149
Histone deacetylase (418 aa)
       
  0.569
EDO98539
Histone deacetylase (339 aa)
       
  0.569
EDO96250
Histone deacetylase (273 aa)
       
  0.569
NIT1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (882 aa)
           
  0.455
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
       
      0.426
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
       
      0.426
PDS1
Phytoene desaturase (564 aa)
           
  0.424
EDO98852
BAH protein (196 aa)
       
      0.400
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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