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PDE5 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PDE5" - Cyclic nucleotide phosphodiesterase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE5Cyclic nucleotide phosphodiesterase (272 aa)    
Predicted Functional Partners:
CYG15
Guanylate cyclase (619 aa)
       
  0.963
CYG11
Guanylate cyclase (584 aa)
       
  0.963
CYG12
Guanylate cyclase (991 aa)
       
  0.963
EDP08674
Predicted protein (249 aa)
     
  0.919
EDP06896
Predicted protein (194 aa)
     
 
    0.912
EDP04479
Predicted protein (823 aa)
     
 
    0.909
EDP03596
Predicted protein (592 aa)
     
 
    0.904
ADK6
Adenylate kinase 6 (235 aa)
         
  0.903
ADK3
Adenylate kinase 3 (264 aa)
         
  0.903
ADK4
Adenylate kinase 4 (221 aa)
         
  0.903
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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