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EDP05310 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05310" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05310Predicted protein (308 aa)    
Predicted Functional Partners:
SKP1
E3 ubiquitin ligase (157 aa)
       
  0.979
CUL1
Ubiquitin ligase SCF complex subunit cullin (725 aa)
     
  0.953
CUL3
Cullin (744 aa)
     
  0.952
RBX1
Ring-box protein (130 aa)
     
  0.924
CUL2
Cullin (782 aa)
     
  0.844
CDC6
Pre-initiation complex, subunit CDC6 (940 aa)
     
 
  0.790
UBQ2
Bi-ubiquitin (153 aa)
     
  0.773
EDO96859
Predicted protein (439 aa)
     
  0.763
CYCB1
B type cyclin (424 aa)
     
  0.762
EDP09480
Predicted protein (412 aa)
     
  0.754
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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