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EDP05336 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05336" - JmjC protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05336JmjC protein (504 aa)    
Predicted Functional Partners:
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
        0.709
EDP03163
Predicted protein (514 aa)
     
        0.700
NOP14
Nucleolar protein (1137 aa)
     
        0.659
EDP06649
Predicted protein (353 aa)
     
      0.650
EDP02992
Predicted protein (235 aa)
     
        0.609
TRM4
tRNA-(m5C) methyltransferase (392 aa)
     
        0.602
EDP05821
Predicted protein (924 aa)
     
        0.598
EDP07113
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (720 aa)
     
        0.591
EDP04787
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (396 aa)
     
        0.579
PRMT3
Protein arginine N-methyltransferase (283 aa)
     
        0.574
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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