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EDP05340 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05340" - RabGAP/TBC protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05340RabGAP/TBC protein (330 aa)    
Predicted Functional Partners:
RABD1
Small rab-related GTPase (203 aa)
     
 
  0.814
GLD1
Glucose-6-phosphate-1-dehydrogenase (286 aa)
 
            0.703
RABG1
Small rab-related GTPase (206 aa)
     
 
  0.496
RABE1
Small rab-related GTPase (218 aa)
     
 
  0.474
CGL44
RabGAP/TBC protein (318 aa)
     
   
  0.457
EDO98130
Hypothetical RabGAP/TBC protein (402 aa)
     
   
  0.457
RABH1
Small rab-related GTPase (211 aa)
     
 
  0.456
EDP09019
Predicted protein (2013 aa)
           
  0.412
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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