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VSP3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"VSP3" - Extracellular matrix protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSP3Extracellular matrix protein (474 aa)    
Predicted Functional Partners:
GAS31
Cell wall protein pherophorin (507 aa)
     
   
  0.825
EDP00792
Cell wall protein (577 aa)
           
  0.727
EDP06936
Predicted protein (388 aa)
     
        0.720
EDP04886
Hypothetical protein (190 aa)
     
        0.720
EDO96489
Predicted protein (118 aa)
     
        0.716
GOX18
Glyoxal or galactose oxidase (733 aa)
     
        0.714
EDO95985
Predicted protein (299 aa)
     
        0.712
EDP05368
Predicted protein (505 aa)
     
        0.710
EDO99017
Predicted protein (740 aa)
     
        0.710
EDP01527
Predicted protein (97 aa)
     
        0.686
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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