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EDP05403 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05403" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05403Predicted protein (519 aa)    
Predicted Functional Partners:
SEC24C
COP-II coat subunit (825 aa)
     
        0.652
AP4E1
Epsilon-adaptin (925 aa)
     
        0.649
EDP03471
Predicted protein (1488 aa)
     
        0.615
EDP05989
SEC7/BIG-like ARF-GEF (1046 aa)
     
        0.580
EDO96309
Predicted protein (319 aa)
     
        0.524
EDO97166
Predicted protein (1125 aa)
     
        0.519
EDP01626
Predicted protein (1656 aa)
     
        0.513
EDP04997
Potential GTPase activation protein (1138 aa)
     
        0.512
EDP02246
Predicted protein (1150 aa)
     
        0.512
EDP02095
SEC7/BIG-like ARF-guanine nucleotide exchange factor (2150 aa)
     
        0.507
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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