STRINGSTRING
EDP05431 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05431" - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP054312-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (207 aa)    
Predicted Functional Partners:
HDS1
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (681 aa)
 
 
  0.983
CMS
4-diphosphocytidyl-2C-methyl-D-erythritol synthase (319 aa)
   
  0.981
CMK1
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (347 aa)
 
 
  0.980
DXR1
1-deoxy-D-xylulose 5-phosphate reductoisomerase (415 aa)
 
  0.903
METM
S-Adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (390 aa)
            0.813
IDS1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (465 aa)
 
   
  0.774
GGPS
Geranylgeranyl diphosphate synthase (345 aa)
     
   
  0.717
DXS1
1-deoxy-D-xylulose 5-phosphate synthase (708 aa)
 
   
  0.687
FPPS
Farnesyl diphosphate synthase (360 aa)
     
   
  0.537
SUMT1
S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase (367 aa)
         
  0.523
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (2%) [HD]