STRINGSTRING
EDP05457 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05457" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05457Predicted protein (155 aa)    
Predicted Functional Partners:
EDP02317
Predicted protein (215 aa)
     
  0.868
EDP07357
Predicted protein (202 aa)
     
  0.853
EDP07128
Predicted protein (418 aa)
     
  0.852
EDP04298
Predicted protein (323 aa)
     
  0.843
EDP07129
Predicted protein (301 aa)
     
  0.839
EDP01728
Predicted protein (190 aa)
     
  0.839
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.742
EDP08757
Predicted protein (399 aa)
     
      0.719
S6K1
Ribosomal protein S6 kinase (319 aa)
     
  0.688
EDP04387
Predicted protein (399 aa)
     
      0.671
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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