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BBS3A protein (Chlamydomonas reinhardtii) - STRING interaction network
"BBS3A" - ARF-like small GTPase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS3AARF-like small GTPase (177 aa)    
Predicted Functional Partners:
EDP05127
Smilar to phosphatidylinositol 3-or 4-kinase (1431 aa)
     
  0.909
EDP01886
ARF-GAP protein (495 aa)
       
  0.908
EDO98460
EMB30/GNOM-like protein (1490 aa)
     
  0.906
BBS4
Bardet biedl syndrome 4 protein (407 aa)
       
  0.904
COPG1
Gamma-cop; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (883 aa)
       
  0.893
EDP05989
SEC7/BIG-like ARF-GEF (1046 aa)
       
  0.859
EDP02095
SEC7/BIG-like ARF-guanine nucleotide exchange factor (2150 aa)
       
  0.859
ANK28
Predicted protein (501 aa)
       
  0.858
AP1B1
Hypothetical protein (186 aa)
       
  0.841
AP4B4
Beta-4-adaptin (858 aa)
       
  0.841
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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