STRINGSTRING
EDP05461 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05461" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05461Predicted protein (417 aa)    
Predicted Functional Partners:
EDP01600
Predicted protein (701 aa)
     
        0.648
OXA1
Protein in OXA1/oxaA family (214 aa)
     
        0.571
EDP07530
Predicted protein (565 aa)
     
        0.522
EDP07743
Predicted protein (204 aa)
     
        0.514
EDP00483
Predicted protein (295 aa)
     
        0.512
POL1B
PolI-like DNA polymerase (894 aa)
     
        0.503
EDP07767
Predicted protein (498 aa)
     
        0.502
EDP01183
Predicted protein (657 aa)
     
        0.479
EDO96781
SWI/SNF chromatin remodeling complex component (962 aa)
     
        0.475
EDP05380
Predicted protein (203 aa)
     
        0.445
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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