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EDP05472 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05472" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05472Predicted protein (2510 aa)    
Predicted Functional Partners:
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
     
        0.681
EDO96468
RNA helicase, activating signal cointegrator 1 (2169 aa)
     
        0.670
EDP05167
Predicted protein (1378 aa)
     
        0.667
EDP03233
Predicted protein (5234 aa)
     
        0.658
EFG5
Elongation factor EF-Tu-like protein (989 aa)
     
        0.652
EDP04138
Predicted protein (417 aa)
     
        0.590
EDP09043
Predicted protein (1130 aa)
     
        0.589
EDP05533
Predicted protein (251 aa)
     
        0.577
EDP05498
Predicted protein (920 aa)
     
        0.556
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
        0.551
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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