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LHCA2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LHCA2" - Light-harvesting protein of photosystem I in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHCA2Light-harvesting protein of photosystem I (246 aa)    
Predicted Functional Partners:
PSAF
Photosystem I reaction center subunit III (227 aa)
     
   
  0.829
PSAD
Photosystem I reaction center subunit II, 20 kDa (196 aa)
     
   
  0.807
PSAO
Photosystem I subunit O (126 aa)
     
   
  0.788
PSAG
Photosystem I reaction center subunit V (125 aa)
     
   
  0.776
PSAN
Photosystem I reaction center subunit N (139 aa)
     
   
  0.765
LHCA3
Light-harvesting chlorophyll-a/b protein of photosystem I, type III (298 aa)
     
   
0.724
LHCA6
Light-harvesting protein of photosystem I (257 aa)
     
   
0.720
LHCA5
Light-harvesting protein of photosystem I (257 aa)
     
   
0.716
PSAH
Subunit H of photosystem I (130 aa)
     
   
  0.713
PSBO
Oxygen-evolving enhancer protein 1 of photosystem II (291 aa)
     
   
  0.704
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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