STRINGSTRING
APG4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"APG4" - Autophagy protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG4Autophagy protein (484 aa)    
Predicted Functional Partners:
APG8
Autophagy protein (134 aa)
     
  0.983
APG6
Autophagy protein (495 aa)
     
 
  0.958
APG3
Autophagy protein (306 aa)
     
 
  0.908
EDP08060
Predicted protein (455 aa)
     
 
  0.878
EDP02226
Apg1/Unc-51-like serine-threonine kinase (749 aa)
     
 
  0.837
PLS1
Phospholipid scramblase (609 aa)
     
 
  0.814
SRP68
Subunit of the signal recognition particle (699 aa)
           
  0.774
NHP2
Nucleolar protein, small subunit of H/ACA snoRNPs (162 aa)
           
  0.731
PEX19
Pex19-like protein (363 aa)
           
  0.712
SRP72
Subunit of the signal recognition particle (746 aa)
           
  0.712
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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