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EDP05498 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05498" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05498Predicted protein (920 aa)    
Predicted Functional Partners:
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
        0.665
EDP08882
Predicted protein (1002 aa)
     
        0.660
EDP05967
Predicted protein (1280 aa)
     
        0.650
EDP09043
Predicted protein (1130 aa)
     
        0.638
EDP09957
Predicted protein (1517 aa)
     
        0.624
EDP06932
ATM/ATR-like kinase (4723 aa)
     
        0.593
EDO99825
Predicted protein (1374 aa)
     
        0.591
EDP01679
Predicted protein (1263 aa)
     
        0.580
EDP07268
Amine oxidase family protein (407 aa)
     
        0.569
EDP05631
Predicted protein; Probable GTP-binding protein that may be involved in cell development (773 aa)
     
        0.562
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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