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EDP05533 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05533" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05533Predicted protein (251 aa)    
Predicted Functional Partners:
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
     
        0.664
EDP04138
Predicted protein (417 aa)
     
        0.649
EDP05167
Predicted protein (1378 aa)
     
        0.633
EDP05472
Predicted protein (2510 aa)
     
        0.577
EDO96468
RNA helicase, activating signal cointegrator 1 (2169 aa)
     
        0.555
SPL1
SF3A1 splicing factor 3a, subunit 1 (400 aa)
     
        0.554
EFG5
Elongation factor EF-Tu-like protein (989 aa)
     
        0.547
EDO96566
Predicted protein (537 aa)
     
        0.526
EDP03233
Predicted protein (5234 aa)
     
        0.521
EDP05147
MAP kinase-like protein (413 aa)
     
        0.511
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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