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EDP05538 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05538" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05538Predicted protein (526 aa)    
Predicted Functional Partners:
EDP06926
Predicted protein (796 aa)
 
0.976
EIF5Ba
Eukaryotic initiation factor (1651 aa)
   
  0.954
EDP09941
Predicted protein (161 aa)
 
  0.953
EDP01065
Predicted protein (100 aa)
 
  0.944
MTF1
methionyl-tRNA formyltransferase (374 aa)
   
 
  0.943
EDP02249
Predicted protein (229 aa)
   
 
  0.942
GTS2
Non-discriminatory gln-glu-trna synthetase (538 aa)
   
  0.936
EDO99187
isoleucyl-tRNA synthetase (902 aa)
   
  0.936
EDO99104
Predicted protein (369 aa)
   
  0.926
GTS1
Gln-glu non-discriminatory tRNA synthetase (763 aa)
   
  0.926
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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