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EDP05546 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05546" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05546Predicted protein (106 aa)    
Predicted Functional Partners:
EDO97610
Predicted protein (176 aa)
       
 
  0.896
CUL1
Ubiquitin ligase SCF complex subunit cullin (725 aa)
     
 
  0.808
CUL2
Cullin (782 aa)
     
 
  0.806
CUL3
Cullin (744 aa)
     
 
  0.801
CSN5
COP signalosome subunit 5 (326 aa)
     
 
  0.801
RBX1
Ring-box protein (130 aa)
       
 
  0.661
EDP03887
Predicted protein (101 aa)
       
      0.655
UBQ6
Ubiquitin fusion protein (805 aa)
     
 
  0.639
UBC1
Ubiquitin activating enzyme E1 (411 aa)
     
 
  0.635
UBQ4
Ubiquitin (242 aa)
     
 
  0.634
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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