STRINGSTRING
CGL78 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CGL78" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGL78Predicted protein (207 aa)    
Predicted Functional Partners:
PBGD1
Porphobilinogen deaminase (349 aa)
     
   
  0.737
HCP2
Hybrid-cluster protein (654 aa)
           
  0.712
PSRP-3
Plastid-specific ribosomal protein 3 (298 aa)
   
        0.577
RSEP1
Intramembrane metalloprotease (699 aa)
           
  0.572
CPLD12
Predicted protein (371 aa)
   
        0.536
PRPL17
Plastid ribosomal protein L17 (173 aa)
     
        0.534
GOX7
Glyoxal or galactose oxidase (675 aa)
           
  0.530
PRPL13
Plastid ribosomal protein L13 (225 aa)
     
        0.526
PSBP3
OEE2-like protein of thylakoid lumen (218 aa)
   
        0.511
AOF1
Amine oxidase-like protein (555 aa)
           
  0.509
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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