STRINGSTRING
EDP05572 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05572" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05572Predicted protein (113 aa)    
Predicted Functional Partners:
EDP06473
Predicted protein (378 aa)
     
        0.653
EDP02699
Predicted protein (272 aa)
     
        0.597
EDP06045
Predicted protein (199 aa)
     
        0.525
EDP07834
Predicted protein (1059 aa)
     
        0.517
PUS5
Pseudouridine synthase (694 aa)
     
        0.517
EDP00024
Predicted protein (357 aa)
     
        0.515
EDP08920
Predicted protein (523 aa)
     
        0.507
EDP08688
Predicted protein (230 aa)
     
        0.507
TRM2C
tRNA (uracil-5-)-methyltransferase (364 aa)
     
        0.505
ITN7
Importin 7 (801 aa)
     
        0.505
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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