STRINGSTRING
SSA17 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SSA17" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSA17Predicted protein (1110 aa)    
Predicted Functional Partners:
FAP234
Flagellar associated protein (1352 aa)
     
 
  0.722
MOT37
Predicted protein (735 aa)
     
 
  0.649
EDO99820
Predicted protein (590 aa)
     
 
    0.647
OFD1
Basal body protein (1352 aa)
     
 
  0.644
MOT3
Predicted protein (1739 aa)
     
 
  0.611
EDP00240
Protein phosphatase 2A regulatory subunit (593 aa)
     
 
    0.601
NPH4
Nephrocystin-4-like protein (1772 aa)
     
  0.597
EDP03269
Predicted protein (249 aa)
     
 
  0.589
BBS7
Bardet-biedl syndrome 7 protein (676 aa)
     
   
  0.589
EDP09100
Predicted protein (654 aa)
     
 
  0.577
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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